degSets

The goal of degSets is to …

Installation

You can install the development version of degSets from GitHub with:

# install.packages("remotes")
remotes::install_github("CECADBioinformaticsCoreFacility/degSets")

Example

This is a basic example which shows you how to solve a common problem:

library(degSets)
degSets::run_app()

Hosted Instance

You can find an example instance of degSets hosted at shinyapps.io

TODO

• BUG upset selection and highlighting not working clicking one sometimes selects another, venn selection works fine but subsets are not highlighted. (following change to distinct sets)

• update on button press not immediately when p-value, LFC thresholds are changed

• better solution to white/black font colour change in cell background colour

• test coverage for other main functions in modsets functions