All functions |
|
---|---|
|
|
alias_samples |
|
barplotformatter |
|
barplotformfun |
|
chr_selectizer |
|
eff_extractor split multiple EFF strings into separate individual EFF strings and convert each to a row in a table |
|
eff_parser parsing snpeff strings EFF field see: http://snpeff.sourceforge.net/SnpEff_manual.html#eff |
|
gen_del_tab |
|
gen_var_eff_DT Generates the datatable of predicted variant effects |
|
gen_var_tab |
|
genotype_selector |
|
get_genotype_class |
|
gtformatter |
|
gtformfun |
|
import_deletions |
|
launches the shinyAppDemo app |
|
layout_ggplotly |
|
loci_by_genotype |
|
loci_plot |
|
mut_type_freq_plot |
|
split_geno |
|
variant_column_selector |
|
wormbase_view Generates an HTML embed tag for a wormbase 'jbrowse' session at the specified location, optinally with a region highlighted. |